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PhysicalConstants - Class in com.oceanoptics.spam.constants
This class provides static constants that are typical in irradiance calculations.
PhysicalConstants() - Constructor for class com.oceanoptics.spam.constants.PhysicalConstants
 
Pixels - Class in com.oceanoptics.spam.wavelengthprocessing
This method returns the pixel number of an array of pixel values.
Pixels() - Constructor for class com.oceanoptics.spam.wavelengthprocessing.Pixels
 
PLANCK_CONSTANT_h - Static variable in class com.oceanoptics.spam.constants.PhysicalConstants
h is Plank's constant.
plusMatrix(Matrix) - Method in class com.oceanoptics.spam.numericalmethods.Matrix
Adds two Matricies together.
PreNonUnityCorrection - Class in com.oceanoptics.spam.preprocessing
Nonunity correction is a preprocessing function that performs a calculation to compensate for a reflection standard that is not perfectly white.
PreNonUnityCorrection() - Constructor for class com.oceanoptics.spam.preprocessing.PreNonUnityCorrection
Creates a new instance of PreNonUnityCorrection
PreReferenceMonitor - Class in com.oceanoptics.spam.preprocessing
This class provides reference monitoring capabilities.
PreReferenceMonitor() - Constructor for class com.oceanoptics.spam.preprocessing.PreReferenceMonitor
No instances allowed.
processReflectionArray(double[]) - Static method in class com.oceanoptics.spam.advancedprocessing.AdvancedKubelkaMonk
 
processReflectionArray() - Method in class com.oceanoptics.spam.advancedprocessing.AdvancedKubelkaMonk
 
processSpectrum(double[], double[], double[], double[], double, double, boolean) - Static method in class com.oceanoptics.spam.advancedprocessing.AdvancedAbsoluteIrradiance
Absolute Irradiance Mode calculates the true irradiance of a spectrum, displayed in actual units incident on the probe's collection area.
processSpectrum(double, double, boolean) - Method in class com.oceanoptics.spam.advancedprocessing.AdvancedAbsoluteIrradiance
 
processSpectrum(double[], double[], double[], double[], double, double, boolean) - Static method in class com.oceanoptics.spam.advancedprocessing.AdvancedIrradianceCalibration
This method caluclates a calibration file using a light source needed in obtaining an absolute irradiance measurment.
processSpectrum(double, double, boolean) - Method in class com.oceanoptics.spam.advancedprocessing.AdvancedIrradianceCalibration
 
processSpectrum(double[], double[], double[]) - Static method in class com.oceanoptics.spam.coreprocessing.CoreAbsorbance
This method calculates the the ratio of transmitted light over incident light.
processSpectrum() - Method in class com.oceanoptics.spam.coreprocessing.CoreAbsorbance
 
processSpectrum() - Method in class com.oceanoptics.spam.coreprocessing.CoreReflection
 
processSpectrum(double[], double[], double[]) - Static method in class com.oceanoptics.spam.coreprocessing.CoreReflection
This method calculates the reflection of a solution.
processSpectrum(double[], double[], double[], double[], double) - Static method in class com.oceanoptics.spam.coreprocessing.CoreRelativeIrradiance
This method computes the relative irradiance incident on a surface.
processSpectrum(double) - Method in class com.oceanoptics.spam.coreprocessing.CoreRelativeIrradiance
 
processSpectrum(double[], double[], double[]) - Static method in class com.oceanoptics.spam.coreprocessing.CoreScope
This method copies the sample spectrum into a new object.
processSpectrum() - Method in class com.oceanoptics.spam.coreprocessing.CoreScope
 
processSpectrum(double[]) - Static method in class com.oceanoptics.spam.coreprocessing.CoreScope
This method copies the sample spectrum into a new object.
processSpectrum(double[], double[]) - Static method in class com.oceanoptics.spam.coreprocessing.CoreScopeMinusDark
This method substracts off the dark intensities from the raw intensities received from the spectrometers A/D converter.
processSpectrum() - Method in class com.oceanoptics.spam.coreprocessing.CoreScopeMinusDark
 
processSpectrum(double[], double[], double[]) - Static method in class com.oceanoptics.spam.coreprocessing.CoreTransmission
This method computes the transmission measurement for the sample relative to the amount that passes through the reference.
processSpectrum() - Method in class com.oceanoptics.spam.coreprocessing.CoreTransmission
 
processSpectrum(double[], double[], double[]) - Static method in class com.oceanoptics.spam.preprocessing.PreNonUnityCorrection
Calculates the nonunity correction to compensate for a reflection standard that is not perfectly white.
processSpectrum(double[]) - Static method in class com.oceanoptics.spam.wavelengthprocessing.Gigahertz
This method converts wavelengths (nm) into Gigahertz (GHz).
processSpectrum(double[]) - Static method in class com.oceanoptics.spam.wavelengthprocessing.Microns
This method converts wavelengths in nanometers (nm) to microns (µm).
processSpectrum(double[]) - Static method in class com.oceanoptics.spam.wavelengthprocessing.Pixels
This method returns an array of pixel numbers that correspond to the given array of pixel values.
processSpectrum(double[], double) - Static method in class com.oceanoptics.spam.wavelengthprocessing.RamanShift
This method converts wavelengths (nm) into Raman Shift using the laser wavelength (nm) parameter.
processSpectrum(double[]) - Static method in class com.oceanoptics.spam.wavelengthprocessing.Wavenumbers
This method converts and array of wavelengths in nanometers to wavenumbers.
processSpectrumNonStatic(double[], double[], double[]) - Method in class com.oceanoptics.spam.coreprocessing.CoreReflection
 
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